Faraday's Law of induction states that the work done per unit charge by the (induced) electric force along a loop of wire, or the emf, is minus the rate of change of magnetic flux through the loop/surface and is given by the equation $$\mathcal{E}_{Ind.}=\oint \vec E_{Ind.}d\vec l=-\frac{d\Phi_B}{dt} \tag{1}$$
The minus sign is necessary because the induced current must travel in a way such that the induced magnetic field produces a change in flux that is opposite to that of the original magnetic field, so that energy is conserved. (Lenz's Law)
So according to Eq. $(1)$ when the magnetic flux through an arbitray loop increases, that is $$\frac{d\Phi_B}{dt}>0 \tag{2}$$ the induced emf $\mathcal{E}_{Ind.}<0$.
*But if $\mathcal{E}_{Ind.}$ is defined as "the work done per unit charge by the (induced) electric force along a loop of wire" or $W_{Ind.E}/q$, how can it ever be negative (assuming q to be positive) if the induced electric force is always acting along the direction of motion of the positive charges in the induced current?
*Shouldn't the work done by an electric force $W_E$ only be negative if the electric force is acting against the direction of motion (i.e. an external agent is pushing the positive charge from a region of lower potential to higher potential)?
I thought that in general, the $\mathcal{E}$ and V symbols for a circuit denote $\Delta V_{-\to +}$ (and hence = $W_{E,+ \to-}$ since $-W_{E, - \to +}=W_{E,+ \to-}$) since they always take positive values (apart from the reading of a voltmeter that's connected the wrong way around).
*So does this imply that the $\mathcal{E}_{Ind.}$ symbol in Faraday's Law is different to the $\mathcal{E}$ that appears in the cell of a circuit (because $\mathcal{E}_{Ind.}$ can be negative)?