I have studied an introductory course in quantum mechanics, and yet I still do not understand the significance of a phase difference between quantum states that a system is in a superposition of. In my lecture notes, it is stated that
Form a linear combination of two quantum states:
$|\psi \rangle = c_1|\phi_1\rangle + c_2|\phi_2\rangle $
$|\psi \rangle = e^{i\theta_1}|\phi_1\rangle + e^{i\theta_2}|\phi_2\rangle $
$|\psi \rangle = e^{i\theta_1}(|\phi_1\rangle + e^{i(\theta_2-\theta_!)}|\phi_2\rangle) $
The resultant vector, and therefore the outcome of any experiemt, depends on the relative quantum phase difference between the two states
This has me confused on many levels. Aside from the fact that the state is simple not normalised here (we would require a factor of $\frac{1}{\sqrt2}$ at the front), the magnitudes of each of the coefficients are equal, unless we allow $\theta$ to be complex which I do not think is intended here.
Also, I initially thought that the outcome of some measurement is only dependent on the magnitudes of the coefficients, and not their phase. This is immediately obvious if the eigenstates of the observable that you are measuring are the $|\phi_i\rangle$, although I considered whether it might be dependent on the relative phase of the coefficients if $|\phi_i\rangle$ are not the eigenstates. I think I then get a phase-dependent factor in the expectation value, although I would like verification on this. An additional problem that then brings up is that the result is sensitive to multiplying a basis vector by an arbitrary phase factor $e^{i\theta}, which it shouldn't be, although I think this might be resolved in considering the coefficients of some state in terms of the eigenstates of the observable.
Emilio Pisanty's answer to this question gos some way towards answering my questions, however it only mentions the significance of the phases when two states are superposed. However experiemntally, I don't understand what thi means. Does it mean having two non-entangled photons, say, and performing an experiment on them? I thought that this becomes a new system and the basis vectors form this are found from the cartesian product of basis vectors of the two states, and not their sum. I feel like this is such a basic concept, however I do not understand it! I get how a system can be in a superposition of states of some chosen basis and you can choose a different basis so that the state is in one of the basis states. However what does it mean to have two existing states, and then superpose them? Surely this means you have two systems and are interacting them in some way, but I don't see how...
Summary of question:
In what way and in what contexts does the phase between coefficients in a quantum superposition matter, and does the term 'relative quantum phase different' refer only to phase of coefficients, or also to their magnitudes which would seem to make more sense.