In elementary explanations of lightning, it's generally stated that the clouds are negatively charged, the Earth is positively charged, and lightning is a discharge between the two. E.g. this source says:
As ice crystals high within a thunderstorm flow up and down in the turbulent air, they crash into each other. Small negatively charged particles called electrons are knocked off some ice crystals and added to other ice crystals as they crash past each other. This separates the positive (+) and negative (-) charges of the cloud. The top of the cloud becomes positively charged with particles called protons, while the base of the cloud becomes negatively charged.
Okay, but why does the base of the cloud become negatively charged? Why can't it be all the base that's positively charged?
I'm surprisingly unable to find an explanation for this. It's commonly-taught as a fact, without an explanation given.