Is it possible to fill the ballon or a bottle with vacuum? Is it possible to fill the ballon or a bottle with vacuum? If so how do they do it? With a vacuum machine that sucks all the air inside the substance?
 A: The way your question is worded, it's like you mean "filling a balloon with vacuum" or with "nothing". If so, then that is meaningless, since by definition, "nothing" cannot occupy a space. However, I suspect this is not what you mean.
If you mean using a vacuum to inflate a balloon, then initially the balloon must have some gas. The chamber containing the balloon is evacuated which decreases the pressure in the chamber, thus increasing the pressure in balloon causing it to expand.

With a vacuum machine that sucks all the air inside the substance?

But something tells me you might be referring to vacuum sealing, the process of packing a product where air is removed from the package just before sealing it. One way to do this is to already have the container and contents inside it, placed in a vacuum chamber and sealed. Since they were sealed at low pressure, there is no need to remove air anymore. When you open the package you'll hear a hissing sound as air rushes back into the container.
Find more information on how vacuum sealing is done, click here.
