The general Schrödinger equation
$$
i\partial_t \psi= H\psi
$$
is simply the infinitesimal version of the statement that time-evolution is unitary (preserves inner products). This is just as true in relativistic QFT as it is in non-relativistic QM. For example, quantum chromodynamics can be written in this form. The symbol $\psi$ denotes an element of the Hilbert space (a state-vector), and $ H$ is the generator of time-translations. This is very generic.
That's in the Schrödinger picture, where the state-vector is parameterized by time and the observables are not. Even if the theory is actually Lorentz symmetric, that symmetry is obscured in the Schrödinger picture. In relativistic QFT, Lorentz symmetry can be made manifest by working in the Heisenberg picture instead, where the field operators (used to construct observables) are parameterized by both time and space, and the state-vector is not. The Hamiltonian $ H$ is the same in either case. In the Heisenberg picture, a field operator $\phi(t,x)$ obeys
$$
\partial_t\phi(t,x)\propto [ H,\phi(t,x)]
$$
and
$$
\partial_x\phi(t,x)\propto [ P,\phi(t,x)]
$$
where $ H$ is the total-energy operator (aka Hamiltonian, the generator of time-translations) and $ P$ is the total-momentum operator (the generator of translations in space). For simplicity, I've only indicated one spatial dimension. The operator $H^2-P^2$ is the total-mass-squared operator. "Total" means the whole system, not just one particle; in relativistic QFT, the number of particles is generally not even well-defined.