In what way is mass converted into energy in nuclear reaction? My book says:

In nuclear reactions, the number of protons and the number of neutrons are the same on the two sides of equation

What I have read:
The total binding energy of nuclei on the left side need not be the same as that on the right-hand side. The difference in these binding energies appears as the energy released or absorbed in a nuclear reaction. Since binding energy contributes to mass, we say that the difference in the total mass of nuclei on the two sides gets converted into energy or vice-versa.
Real question
So, If both the number of protons and the number of neutrons are conserved in each nuclear reaction, in what way is mass converted into energy(or vice-versa) in a nuclear reaction? Since It is only an example of mass-energy interconversion, then why don't we see the difference in mass of neutron and proton on both sides of equations. I mean mass of (what) is converted into energy.
Please explain.
I am a high-school student.
 A: Every day observations work with classical physics. If you have 1 gold coin with a mass m, 100 gold coins will have a mass 100m. All the economies of humanity work on the conservations of mass, from wheat production to oil wells mass does not change, is additive and is conserved.
Nuclear reactions were a surprise and are no longer in the  framework of classical physics. One needs quantum mechanics and special relativity to really understand what is going on.
Chemists by the year 1789 , long before any special relativity and quantum mechanics appeared, discovered that they could organize the chemical elements . The periodic table of elements  shows the A number , which is the atomic weight of the element, i.e. the atomic weight divided by the mass of hydrogen, and Z, the number of positive charges equal to the electron number in the nucleus. They found out that there was a binding energy per nucleon 

At the nuclear level, nuclear binding energy is the energy required to disassemble a nucleus into the free, unbound neutrons and protons it is composed of. It is the energy equivalent of the mass excess, the difference between the mass number of a nucleus and its true measured mass.Nuclear binding energy derives from the nuclear force or residual strong force, which is mediated by three types of mesons. 


This makes sense only within the context of special relativity, where mass is not a conserved quantity. 
You ask:

I mean mass of (what) is converted into energy. Please explain.

An example for fusion: Deuterium and Tritium will release the difference in the binding energies of the end products into the kinetic energy  of the end products.
Deuterium + Tritium → Helium + neutron + 340,000,000,000 Joules per gram
The masses of (deuterium+ tritium)  will be larger than the mass of Helium +neutron, because  mass is not a conserved quantity at this level, it is connected directly with energy according to the special relativity equations .
A: The idea of binding energy shows up when we compared the mass of an atom with the mass of the individual pieces of the atom. For example, the mass of a helium-4 atom is 4.002603 atomic mass units (u). (I took this from this reliable website of nuclear data. Each atomic mass unit is the equivalent of 931.5 MeV/c^2, so the mass energy of the helium-4 atom is 3728.4247 MeV. That includes the mass of the electrons, too.
The mass energy of a neutron is 939.5714 MeV, and that of a hydrogen-1 atom (a proton with its electron) is 938.7890 MeV. That means the constituents (2 hydrogen-1 atoms and 2 neutrons) have a total mass of 3756.7207 Mev. (The binding energy of the electrons is on the order of eV, much smaller than the significant figures I have here.)
The difference, 28.2960 MeV, is the binding energy. The individual mass total is greater than atomic mass of the helium, so if you could assemble these 4 pieces in one event, there would be a release of over 28 MeV of energy. You could do the same with other atoms, such as uranium-235 or carbon 12. In radioactive decay, the binding energy (or the missing mass energy) of the products is greater than the binding energy of the original atom. Some of the mass of the original atom has been converted into kinetic and electromagnetic energy and a smaller mass is left over, even though the effective charge and proton/neutron total count doesn't change. Notice that the proton count can change and the neutron count can change (beta or positron decay).
