$\mathbb{R}^3$ and $\mathbb{T}^3$ are both manifolds. These have a complicated mathematical definition, but for us physicists they are simple to visualise. $\mathbb{R}^3$ is regular three dimensional flat space - to see what this is like just look around you.
$\mathbb{T}^3$ is the three dimensional torus. This is a bit harder to understand, but it just means that if you travel in a straight line in any direction you end up back where you started. This isn't a realistic model of the universe (or at least we don't think so) but in many cases it makes maths easier because the universe represented by $\mathbb{T}^3$ is finite in size and some of the problems caused by dealing with an infinite universe no longer apply.