After checking various websites, I've seen the conjugate momentum density defined as either: \begin{align*} P_r ~=~ \frac{\partial \mathcal{L}}{\partial \dot{A}_r} \end{align*} or \begin{align*} P_r ~=~ \frac{\partial \mathcal{L}}{\partial(\partial_0 A_r)}. \end{align*}
When you are working in natural units, there is no difference. However, when you don't take $c=1$ (or if you're working in an exotic metric), the difference is important, because $\partial_0 = \frac{\partial}{\partial (ct)} \neq \frac{\partial}{\partial t}$. It may seem trivial but I think it is worth being sure.