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when toggle format what by license comment
Jul 14, 2018 at 9:26 history edited user197851 CC BY-SA 4.0
minor clarification
Jul 14, 2018 at 9:17 comment added user197851 @Mami I have edited my answer accordingly, hope this helps.
Jul 14, 2018 at 9:14 history edited user197851 CC BY-SA 4.0
added a section on correcting initial velocities, as requested in comment
Jul 14, 2018 at 2:49 comment added Mami Thank you for your answer. I have initialised the positions and velocity randomly and have used a velocity re-scaling thermostat the equilibrate the system. Could you please elaborate on the "global correction" that I could use to eliminate the angular momentum? Shouldn't the total angular momentum be conserved as the system is rotationally invariant?
Jul 13, 2018 at 15:02 history edited user197851 CC BY-SA 4.0
added a mention of Lowe-Andersen thermostat
Jul 13, 2018 at 9:22 history answered user197851 CC BY-SA 4.0