I don't deal with drag forces often, but I think the equation for drag is
$$F_D=Cv^2,$$
where $F_D$ is in the same direction as $v$, and $C$ contains all the various things -– density of air, cross-section, drag coefficient, etc. Importantly, $C$ depends on the orientation of the object. What I am going to do is assume the bullet falls without rotating -– so it stays parallel to the ground during its entire motion (in both cases - you drop it in the same direction you shoot it).
In the first case the equation of motion is found via Newton's second law:
$$\Sigma F_y=F_{D,y}-F_g=ma_y\rightarrow a_y=\frac{C_yv_y^2}{m}-g$$
In the second case, we need to consider both directions:
$$\Sigma F_y=F_{D,y}-F_g=ma_y\rightarrow a_y=\frac{C_yv_y^2}{m}-g$$ $$\Sigma F_x=-F_{D,x}=ma_x\rightarrow a_x=-\frac{C_xv_x^2}{m}$$
So to find the time of flight of either case one would have to integrate the $y$ equation, but in either case it is the same. Therefore, the time of flight for these two situations is the same. But of course, I'm assuming the bullet does not rotate during it'sits motion.
If it did rotate, then the value of $C$ would be constant -– it would be $C_x$, because that's the direction of motion -– and $F_D$ would be in the direction of motion of the bullet, and $v$ would be the speed. In this case I believe the other answer would be correct, and it they would reach the ground at different times.