Subdiscipline of theoretical physics which consists in the study of physics problems using numerical algorithms. PLEASE NOTE that questions about computational methods and/or programming are OFF-TOPIC on Physics.SE.

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Discrete approximation of charge density

Given the electric potential $\Phi(r)$ and the Poisson's equation: $$ \nabla^2 \Phi(r) = - 4\pi \rho(r)$$ Consider the 2-dimensional case and let's say that I want to discretize this using a square ...
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113 views

Deriving the change in the Helmholtz free energy in the context of the free energy perturbation method

I am reading Free Energy Calculations: Theory and Applications in Chemistry and Biology by Chipot and Pohorille. At the beginning of the text (page 19, for example), the authors define the Helmholtz ...
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1answer
113 views

reversible cellular automata

Let's suppose a cellular automaton has a value $b(r,t)$ belongs to $Q$ at site $r$ and time $t$, where $Q$ is the set of possible states at each site. Let $N(r, t)$ be the values of the states of all ...
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2answers
163 views

Why are Markov chains better than naive algorithm for Random picking?

I have a question about the problem of coming up with a random distribution of non-overlapping coins in a given two dimensional space. I don't understand why using the random sequential adsorption ...
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2answers
238 views

How to decide convergence of the ensemble average in a Monte Carlo process

I am simulating electromagnetic scattering off a rough surface. The usual process is to do a Monte Carlo simulation, which is briefly described as follows. Generate a randomly rough surface, and ...
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1answer
324 views

Does the universe follow a general physical and computational principle of evolution?

Evolution is a principle in biology, whereby organisms evolve their ability to replicate and multiply in numbers over successive generations. From a computational point of view, the organisms employ a ...
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1answer
46 views

Ground state Phase Diagram of Bose-Hubbard Model

The Hamiltonian of Bose-Hubbard model reads as $$H=-J\sum\limits_{<i,j>}b_i^{\dagger}b_j+h.c.+\frac{U}{2}\sum\limits_{i}n_i(n_i-1)-\mu\sum\limits_in_i~~~~~~~~~(1)$$ For this we plot phase ...
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44 views

Calculate Euler equations of fluid dynamics without division?

I'm working on the calculation of the Euler equations with the finite volume method. Unfortunately I'm not allowed to do a division. So I'm wondering if there's a form which does not need a division. ...
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1answer
70 views

Rigid body collision, 3 circles in contact

I'm working on a 2d physics simulation. It's a continuous time simulation, that is, it uses swept shapes over the time-frame and geometrical/vector 'analysis' to determine most immediate time of ...
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1answer
73 views

Motion of rigid body system in absense of work

In the absence of work on the system, is there a closed form equation for the motion of a set of constrained rigid bodies (let's say, using Revolute (ie: simple pivot) constraints)? If the bodies are ...
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1answer
65 views

what is two species Bose Hubbard Model? what chage it takes on Fock basis representation?

The Hamiltonian will look like \begin{equation} \ H= -t^a\sum_{<i,j>}^{}(a_i^\dagger a_i + h.c.)-t^b\sum_{<i,j>}^{}(b_i^\dagger b_i + ...
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1answer
372 views

Magnetic field of permanent magnet [closed]

Hi I am looking for some code to (computationally) calculate the magnetic field of a rectangular permanent magnet in 3D space. Preferably I could edit it to add in my own dimensions. Does anyone know ...
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1answer
110 views

Parameter determining argon phase

Currently I am working a molecular simulation to determine phases of an argon NPT ensemble using Lennard Jones potential. Mainly I use the radial distribution function to determine solid, liquid, or ...
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1answer
271 views

Help: 3D visualization of magnetic field around moving point charge

The diagrams I'm able to find online only show the concentric field lines in the particle's plane, perpendicular to the motion, which of course generalizes to the cylindrical shape around a conductor. ...
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2answers
249 views

Where does Computer Science background students fit in Theoretical Physics [closed]

I am basically an Electronics student - background in computer science (that's where I want to work). I applied for an internship in USA in a research institute where the group is focused in ...
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1answer
239 views

Numerical algorithms to generate a random wavefunction from a thermal ensemble

I am seeking an algorithm to generate a random wavefunction = $\sum {c_i |\varphi _i\rangle }$ from a thermal ensemble, whose density matrix $\rho \sim e^{-\beta H}$, without the need to diagonalize ...
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1answer
179 views

What software can I use to simulate supersonic gas particle flow? [closed]

Please please help me out with this. I am trying to find a software/program that I could use the simulate the scattering effect of light when it strikes gas particles moving at supersonic speeds? ...
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0answers
42 views

Which are the good universities for doing PHD in computational physics? [closed]

Currently i am doing MSC(physics) from Pune university, India. And I want to do PHD in computational physics as it interests me the most. So I want to know which universities will be a good option for ...
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35 views

How to get discretization coefficients of matrix $A$ in Finite Volume Method (FVM)? [closed]

First we have Discretization of the Transport Equation $$ \frac{\partial \rho \phi}{\partial t} + \nabla(\rho U \phi) - \nabla (\rho \Gamma_\phi \nabla \phi) = S_\phi (\phi) $$ In Finite Volume ...
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52 views

Application of wavelets in computational electromagnetics

I am a first-year graduate student (electrical eng.); wavelets is one of the courses that I am taking presently. As part of the course, I plan to explore application of wavelets in computational ...
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1answer
37 views

2nd - 3rd Year Physics Labs [closed]

I'm looking to propose a new physics laboratory experiment, does anyone have any particularly fond memories of an experiment they carried out whilst at University? I'd like to include a section that ...
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0answers
219 views

Numerical solution of two coupled second order differential equations of motion [closed]

Is there a numerical algorithm for solving a pair of coupled second order differential equations? This question arises from a homework problem that I have that involves two dimensional projectile ...
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59 views

How does the Lennard Jones Potential changes for interaction between particles of different sizes?

I am interested in incorporating a Lennard-Jones potential in a simulation. When the interaction only involves the same type of particle, with same characteristics, we can use reduced units, scaling ...
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71 views

Gerstner Wave Formula to Vertex information $(x,y,z)$

I have created a program, that draws a plane mesh, and allows to me edit or animate all the separate vertices along it. The idea behind it, is for me to be able to create a gridMesh based wave ...
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302 views

Is Bremermann's limit redundant with Landauer's limit for all practical purposes?

Trying to understand the physical limits to computation, I notice that among these we have two types of limits that constrain the minimum allowable energy for a computation. Limits that constrain ...
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47 views

Find out ground sates for large 2D classical spin model

Reaching the ground state of a large 2D classical spin model (e.g. classical Heisenberg model) might be a relatively difficult task while using conventional "flip/reject" Monte Carlo method. The ...
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163 views

What is the drag coefficient of an open wedge?

To check my two dimensional CFD calculation I am looking for reference data on the drag coefficient of an open wedge. The geometry is shown below, together with the flow direction. I have found ...
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1answer
111 views

Simulation of an one dimensional driven diffusive system [closed]

I'm currently writing a simulation in python with scipy and matplotlib to reproduce an one dimensional driven diffusive system described in this paper from M.R. Evans et al. The system consists of ...
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104 views

RGEs of the MSSM - problems with Mathematica

I'm having some troubles with the trilinear soft couplings of the MSSM RGEs. I've used the ones written in Martin's supersymmetry primer and I run them using mathematica, if I do so without taking ...
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157 views

How to solve Boltzmann equation using monte carlo methods? [closed]

I'm trying to solve for electron and hole distribution function using Boltzmann equation with various scattering mechanisms. Since I land up with an integro-differential equation, analytical soln. is ...
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160 views

2D quantum well energy spectrum (analytical vs numerical)

I am trying to understand the energy spectrum difference between the analytical and the approximated solution for a quantum well. The particle is inside a box with domain $\Omega=(0,0)$X$(1,1)$. For ...
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0answers
120 views

What libraries are available for solving problems at the college physics level? [closed]

Are there any libraries available for solving problems at the level of college physics? In particular, I'm interested in libraries for general purpose programming languages that can calculate results ...
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64 views

numerical investigation of stability [closed]

I am trying to find the required specifications of an paul RF trap, in which a proton can be confined.(trap dimensions,voltage frequency and amplitude used, etc). I have to solve the equations of ...
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296 views

fun computational physics projects [closed]

I want to learn how to code in Java and am in need of some cool computational physics projects that would provide motivation to do so. I was wondering if you guys could list some medium-level ...
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41 views

bond energies database [closed]

I’m looking for a public database of bond energies of biochemical compounds. Do you know about any? Otherwise, which is the standard computational methodology to calculate them? Any references would ...
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659 views

Calculating semi-major axis of binary stars from velocity, position and mass

I'm trying to calculate the 'instantaneous' semi-major axis of a binary system with two equal (known) mass stars for an $N$-body simulation. I know their velocities and positions at a given time, but ...
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199 views

Modeling the trajectory of a particle in an Electric field [closed]

[This problem has been resolved, sorry for posting in the wrong forum!] (I was trying to model the trajectory of a particle in an electric field.)
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1answer
271 views

Boundary condition for water waves generation

I am trying to model water wave propagation in 2D with CFD. What would be a suitable boundary condition to generate the waves on the left boundary? Currently I vary the fraction of water above the ...
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0answers
114 views

Calculating collisions in realtime - dealing with a delay in time [closed]

I wasn't sure in which stackexchange to post this, since the questions deals with a lot of different topics. I've posted it first at stackoverflow, but I've been redirected here... Suppose: You're ...
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105 views

Grand canonical ensemble with interaction, simulation doubts

First of all, this is a follow-up of my first question. The idea is the same, every state would consist of some particles in a line (with an energy associated) and the particles can not be nearer than ...
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296 views

Acceptance probability 2D Ising Model

Disclaimer: I just found a possible solution - eventhough i don't really understand, whats wrong with my prior approach. Edit: I just tried to calculate it from scratch and found the following: $E ...
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3answers
197 views

Meaning of “Gradient with respect to coordinates of particle” in SPH

I'm currently trying to implement a simple SPH simulation based on a variety of papers. However as I'm not a trained physicist nor mathematician I have a small issue with the following notation and ...
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1answer
66 views

Failure of a simple stat mech simulation

so I did a simple simulation that I thought would yield a Boltzmann distribution, but it failed to, and I was wondering if anyone has insight into why it failed. Ok, so I had a simple discrete system ...
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1answer
145 views

Reference-request: Computational science and physics [closed]

I'm interested in the following question: Is Nature computable at it's most fundamental level? Can anyone suggest any works (books, papers / articles, reviews) related to the above question? ...
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1answer
515 views

Calculating Kramers-Kronig using Mathematica

First of all, I know there is a Mathematica group in beta, but I don't think the problem of the following is directly a Mathematica issue. I am trying to calculate the change of the refractive index ...
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1answer
171 views

Filtering and extracting turbulent data from instantaneous dataset

I have collected data on flow velocity at 1 Hz sampling rate for 25 hours using a high resolution acoustic Doppler current profiler (HR-ADCP). how I can decide up to which period is the mean ...
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0answers
27 views

Poisson equation solver with specific boundary condition

I want to solve 2d Poisson equation with this Boundary conditions below $$u(-5,y) = 0 , \\ \frac{\partial u(x,y)}{ \partial x} = 0 \,\,{\rm at}\,\, x = -5\\ u(x,-5) = u(x,5)$$ Now my question is ...
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13 views

Verlet timestep

I am using velocity Verlet in molecular dynamics. Is just a simple question, if a simulation using time-step femtosecond, in velocity Verlet is just necessary $dt = 10^{-15}$ to use femtosecond?
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23 views

Computational package to find the ground state of a particle in 3D domain

I am developing a numerical algorithm to find the ground state of a Hermitian matrix. Obvious applications are quantum many-body systems and particles in various potentials. I am a little stuck with ...
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56 views

Need help simulating a fan

I'm trying to write some code to approximately simulate a number fans in an arbitrarily shaped room. I'm not real strong in physics, and could use some help. If it helps I'm not interested in fine ...