In thermodynamics I can e.g. compute the properties of ideal gases with certain energies $U_1,U_2$ in boxes with certain volumes $V_1$ and $V_2$. Say I have two such boxes and they have some specific parameter values, like say I know their temperatures $T_1,T_2$. Now I put them together, the gases can interact and I thereby construct a new box with volume $V_1+V_2$ and the energy is $U_1+U_2$. Using the laws of thermodynamics, I can compute everything else again now. Say I find a new temperature $T_{\text{new}}$.
One says that the temperatures of the gases in the systems changed by putting the boxes together. However, on the computational side what I did was just considering a system of new specifications. To get the new result, I didn't have to enter the real world staring conditions except for the variables which also were necessary to compute their respecive properties - effectively, the theory didn't have to tell me how the system changed, just what the restrictions are - and I basically entered into a new system with these values. For example, it's not relevant which gas had with specifications before. I just did a little trivial algebra and computed what has to be. When then talk about a change of entropy and how the gas behaves, but that seems to be only decorative.
If I say that the second law of thermodynamics tells me that heat flows from a system with high temperatures to a system of low temperature I'll be able to derive rules for the entropy say, how the combined system has to look like if I state their variables and insist on extensivity of certain variables and so on - but it's not about change in the sense that I compute how the system developes from one point to the other in details. Rather I just compute how the end configuration has to be.
My question is
Is the starting configuration of a thermodynamics system ever relavant?
And secondly,
In thermodynamics, if I compute "the change a system" in the sense of the above example, do I always induce the necessarity for doing such a thing by stating "now we bring system one and system two in contact"?
